Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate isomerase | PMI12_04495 | Not Available | Negative | 4710344 - 4710751 | 14711.7 |
| hypothetical protein | PMI12_04496 | Not Available | Negative | 4710765 - 4711592 | 30224.1 |
| aromatic-ring-opening dioxygenase ligab, liga subunit | PMI12_04497 | Not Available | Negative | 4711589 - 4711924 | 12337.8 |
| hypothetical protein | PMI12_04498 | Not Available | Negative | 4711928 - 4712902 | 33871.0 |
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | PMI12_04499 | Not Available | Negative | 4712899 - 4714365 | 52419.8 |
| hypothetical protein | PMI12_04500 | Not Available | Negative | 4714386 - 4715378 | 34445.8 |
| bifunctional isomerase/decarboxylase subunit like protein | PMI12_04501 | Not Available | Negative | 4715421 - 4716191 | 28400.9 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase | PMI12_04502 | Not Available | Negative | 4716188 - 4716823 | 22379.2 |
| homoprotocatechuate degradation operon regulator, hpar | PMI12_04503 | Not Available | Negative | 4716820 - 4717254 | 16228.7 |
| dna repair protein rada | PMI12_04504 | Not Available | Positive | 4717355 - 4718746 | 48506.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
