Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxymuconate cyclase | PMI12_04323 | Not Available | Positive | 4512029 - 4513096 | 37786.8 |
| hypothetical protein | PMI12_04324 | Not Available | Positive | 4513132 - 4514127 | 34057.2 |
| phosphatidylserine decarboxylase precursor | PMI12_04325 | Not Available | Positive | 4514186 - 4515073 | 32390.1 |
| putative transcriptional regulator | PMI12_04326 | Not Available | Positive | 4515250 - 4515669 | 14394.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PMI12_04327 | Not Available | Positive | 4515754 - 4516104 | 12217.3 |
| transcriptional regulator | PMI12_04328 | Not Available | Negative | 4516323 - 4516787 | 17486.6 |
| branched-chain amino acid aminotransferase, group ii | PMI12_04329 | Not Available | Positive | 4516942 - 4518039 | 39723.4 |
| acetoacetate decarboxylase | PMI12_04330 | Not Available | Positive | 4518100 - 4518942 | 30579.6 |
| demethylmenaquinone methyltransferase | PMI12_04331 | Not Available | Positive | 4519166 - 4519651 | 17501.8 |
| ketopantoate hydroxymethyltransferase | PMI12_04332 | Not Available | Positive | 4520126 - 4520635 | 17407.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
