Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alternative sigma factor rpoh | PMI12_04273 | Not Available | Positive | 4464172 - 4465113 | 34534.3 |
| dna alkylation repair enzyme | PMI12_04274 | Not Available | Negative | 4465157 - 4465981 | 30351.4 |
| sco1/senc/prrc protein | PMI12_04275 | Not Available | Negative | 4465995 - 4466612 | 22081.5 |
| protoheme ix farnesyltransferase | PMI12_04276 | Not Available | Negative | 4466623 - 4467528 | 33144.4 |
| hypothetical protein required for cytochrome oxidase assembly | PMI12_04277 | Not Available | Negative | 4467525 - 4468745 | 43545.4 |
| hypothetical protein | PMI12_04278 | Not Available | Negative | 4468763 - 4469443 | 25050.3 |
| hypothetical protein | PMI12_04279 | Not Available | Negative | 4469430 - 4470281 | 31281.6 |
| protein of unknown function (duf2909) | PMI12_04280 | Not Available | Positive | 4470309 - 4470539 | 8403.86 |
| heme/copper-type cytochrome/quinol oxidase, subunit 3 | PMI12_04281 | Not Available | Negative | 4470620 - 4471501 | 32918.0 |
| protein of unknown function (duf2970) | PMI12_04282 | Not Available | Negative | 4471565 - 4471780 | 7691.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
