Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tade-like protein | PMI12_04243 | Not Available | Positive | 4433259 - 4433732 | 16986.8 |
| flp pilus assembly protein tadg | PMI12_04244 | Not Available | Positive | 4433729 - 4434241 | 18150.6 |
| putative membrane protein | PMI12_04245 | Not Available | Positive | 4434257 - 4436284 | 68710.6 |
| response regulator with chey-like receiver, aaa-type atpase, and dna-binding domains | PMI12_04246 | Not Available | Positive | 4436302 - 4437726 | 52090.2 |
| abc-type oligopeptide transport system, atpase component | PMI12_04247 | Not Available | Positive | 4437818 - 4438061 | 8798.67 |
| abc-type dipeptide transport system, periplasmic component | PMI12_04248 | Not Available | Positive | 4438173 - 4439666 | 54531.2 |
| abc-type dipeptide transport system, periplasmic component | PMI12_04249 | Not Available | Positive | 4439881 - 4441368 | 53424.1 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_04250 | Not Available | Positive | 4441359 - 4442759 | 49718.6 |
| hypothetical protein | PMI12_04251 | Not Available | Negative | 4442769 - 4443395 | 22468.0 |
| transcriptional regulator | PMI12_04252 | Not Available | Negative | 4443440 - 4444300 | 30607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
