Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein, pilin flp | PMI12_04233 | Not Available | Positive | 4424057 - 4424242 | 6217.66 |
| flp pilus assembly protein, protease cpaa | PMI12_04234 | Not Available | Positive | 4424258 - 4424764 | 18084.5 |
| flp pilus assembly protein cpab | PMI12_04235 | Not Available | Positive | 4424846 - 4425841 | 34379.6 |
| flp pilus assembly protein, secretin cpac | PMI12_04236 | Not Available | Positive | 4425888 - 4427285 | 49159.0 |
| flp pilus assembly protein, atpase cpae | PMI12_04237 | Not Available | Positive | 4427323 - 4428606 | 45647.8 |
| flp pilus assembly protein, atpase cpaf | PMI12_04238 | Not Available | Positive | 4428611 - 4429930 | 48810.6 |
| flp pilus assembly protein tadb | PMI12_04239 | Not Available | Positive | 4429908 - 4430921 | 36678.4 |
| flp pilus assembly protein tadc | PMI12_04240 | Not Available | Positive | 4430918 - 4431880 | 34987.3 |
| hypothetical protein | PMI12_04241 | Not Available | Positive | 4431877 - 4432848 | 33820.4 |
| protein of unknown function (duf3613) | PMI12_04242 | Not Available | Positive | 4432845 - 4433240 | 13644.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
