Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_04143 | Not Available | Positive | 4331930 - 4332300 | 13905.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, permease component | PMI12_04144 | Not Available | Positive | 4332311 - 4333081 | 28147.2 |
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_04145 | Not Available | Negative | 4333093 - 4333926 | 30287.8 |
| hypothetical protein | PMI12_04146 | Not Available | Positive | 4334222 - 4337902 | 125096.0 |
| type i secretion system abc transporter, prtd family | PMI12_04147 | Not Available | Positive | 4337993 - 4339786 | 63610.1 |
| type i secretion system abc transporter, prtd family | PMI12_04148 | Not Available | Positive | 4339783 - 4341507 | 61920.6 |
| type i secretion membrane fusion protein, hlyd family | PMI12_04149 | Not Available | Positive | 4341552 - 4342919 | 50061.0 |
| hypothetical protein | PMI12_04150 | Not Available | Positive | 4343047 - 4343427 | 14016.6 |
| oxidoreductase-like protein | PMI12_04151 | Not Available | Negative | 4343529 - 4343750 | 7687.29 |
| aspartyl/asparaginyl beta-hydroxylase-like dioxygenase | PMI12_04152 | Not Available | Negative | 4343858 - 4344754 | 34552.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
