Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemagglutinin-like protein | PMI12_04123 | Not Available | Positive | 4303203 - 4309793 | 206186.0 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_04124 | Not Available | Positive | 4309805 - 4310716 | 32915.4 |
| tannase and feruloyl esterase | PMI12_04125 | Not Available | Positive | 4310810 - 4312528 | 60800.3 |
| trap transporter, dctm subunit | PMI12_04126 | Not Available | Negative | 4312539 - 4314419 | 65148.9 |
| tripartite atp-independent periplasmic transporter solute receptor, dctp family | PMI12_04127 | Not Available | Negative | 4314416 - 4315432 | 36878.3 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_04128 | Not Available | Negative | 4315711 - 4316670 | 33262.0 |
| transcriptional regulator | PMI12_04129 | Not Available | Positive | 4316810 - 4317700 | 32508.8 |
| putative membrane protein | PMI12_04130 | Not Available | Positive | 4317829 - 4318671 | 31021.9 |
| hypothetical protein | PMI12_04131 | Not Available | Negative | 4318864 - 4319922 | 39003.7 |
| dna-binding domain-containing protein, arac-type | PMI12_04132 | Not Available | Positive | 4320173 - 4321213 | 38734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
