Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative taurine catabolism dioxygenase | PMI12_04053 | Not Available | Positive | 4225470 - 4226363 | 33872.3 |
| demethylmenaquinone methyltransferase | PMI12_04054 | Not Available | Positive | 4226394 - 4227101 | 24823.8 |
| transcriptional regulator | PMI12_04055 | Not Available | Positive | 4227261 - 4228079 | 29850.2 |
| putative tim-barrel fold metal-dependent hydrolase | PMI12_04056 | Not Available | Negative | 4228325 - 4229185 | 32299.2 |
| fad/fmn-dependent dehydrogenase | PMI12_04057 | Not Available | Negative | 4229182 - 4230462 | 45550.7 |
| 2-dehydropantoate 2-reductase | PMI12_04058 | Not Available | Negative | 4230621 - 4231703 | 38471.8 |
| hypothetical protein | PMI12_04059 | Not Available | Negative | 4231933 - 4232913 | 34885.2 |
| transposase, is5 family | PMI12_04060 | Not Available | Negative | 4233529 - 4234000 | 17556.3 |
| atpase component of abc transporters with duplicated atpase domain | PMI12_04061 | Not Available | Positive | 4234204 - 4236102 | 69597.6 |
| hypothetical protein | PMI12_04062 | Not Available | Positive | 4236191 - 4237957 | 63842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
