Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, is5 family | PMI12_03960 | Not Available | Negative | 4111921 - 4112691 | 28543.2 |
| integrase | PMI12_03961 | Not Available | Positive | 4113109 - 4114341 | 46113.9 |
| hypothetical protein | PMI12_03962 | Not Available | Positive | 4114673 - 4116322 | 61720.3 |
| morn repeat protein | PMI12_03963 | Not Available | Positive | 4116912 - 4117517 | 22854.4 |
| hypothetical protein | PMI12_03964 | Not Available | Positive | 4117627 - 4118346 | 26600.4 |
| hypothetical protein | PMI12_03965 | Not Available | Negative | 4119522 - 4119899 | 14239.4 |
| hypothetical protein | PMI12_03966 | Not Available | Positive | 4120363 - 4121376 | 37528.2 |
| hypothetical protein | PMI12_03967 | Not Available | Positive | 4121488 - 4121601 | 3993.86 |
| morn repeat protein | PMI12_03968 | Not Available | Negative | 4121886 - 4122203 | 11939.8 |
| hypothetical protein | PMI12_03969 | Not Available | Negative | 4122283 - 4122990 | 25300.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
