Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylosuccinate synthase | PMI12_03880 | Not Available | Negative | 4030851 - 4032197 | 47524.2 |
| hypothetical protein | PMI12_03881 | Not Available | Negative | 4032205 - 4033185 | 35225.0 |
| lipopolysaccharide kinase (kdo/waap) family | PMI12_03882 | Not Available | Negative | 4033219 - 4034202 | 35009.9 |
| cbs domain-containing protein | PMI12_03883 | Not Available | Negative | 4034213 - 4035526 | 47407.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | PMI12_03884 | Not Available | Positive | 4035550 - 4036395 | 30327.7 |
| acetyltransferase, ribosomal protein n-acetylase | PMI12_03885 | Not Available | Negative | 4036418 - 4037134 | 27029.0 |
| transcriptional regulator with hth domain and aminotransferase domain containing protein | PMI12_03886 | Not Available | Positive | 4037229 - 4038707 | 53618.8 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_03887 | Not Available | Negative | 4039231 - 4040028 | 28239.2 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_03888 | Not Available | Negative | 4040084 - 4040737 | 23597.5 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_03889 | Not Available | Negative | 4040762 - 4041433 | 24898.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
