Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02295 | Not Available | Positive | 2395555 - 2396400 | 30075.3 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_02296 | Not Available | Positive | 2396435 - 2397286 | 30643.2 |
| theronine dehydrogenase-like zn-dependent dehydrogenase | PMI12_02297 | Not Available | Positive | 2397395 - 2398432 | 36497.0 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_02298 | Not Available | Positive | 2398479 - 2399144 | 24404.7 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_02299 | Not Available | Positive | 2399158 - 2399817 | 24427.7 |
| abc-type polar amino acid transport system, atpase component | PMI12_02300 | Not Available | Positive | 2399814 - 2400605 | 28424.6 |
| enolase superfamily enzyme related to l-alanine-dl-glutamate epimerase | PMI12_02301 | Not Available | Positive | 2400633 - 2401844 | 45001.6 |
| mannitol-1-phosphate/altronate dehydrogenase | PMI12_02302 | Not Available | Positive | 2401859 - 2403367 | 54099.9 |
| hypothetical protein | PMI12_02303 | Not Available | Negative | 2403390 - 2403764 | 13636.4 |
| family 3 adenylate cyclase | PMI12_02304 | Not Available | Negative | 2404020 - 2404967 | 34263.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
