Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein, atpase cpaf | PMI12_02225 | Not Available | Negative | 2310861 - 2312231 | 50784.9 |
| flp pilus assembly protein, atpase cpae | PMI12_02226 | Not Available | Negative | 2312268 - 2313419 | 41440.9 |
| tade-like protein | PMI12_02227 | Not Available | Negative | 2313448 - 2313891 | 15973.2 |
| tade-like protein | PMI12_02228 | Not Available | Negative | 2313888 - 2314340 | 16093.6 |
| hypothetical protein | PMI12_02229 | Not Available | Negative | 2314350 - 2315585 | 42087.2 |
| flp pilus assembly protein, pilin flp | PMI12_02230 | Not Available | Negative | 2315632 - 2315808 | 6283.82 |
| flp pilus assembly protein, pilin flp | PMI12_02231 | Not Available | Negative | 2315900 - 2316115 | 7588.33 |
| hypothetical protein | PMI12_02232 | Not Available | Negative | 2316239 - 2316535 | 10156.2 |
| flp pilus assembly protein, secretin cpac | PMI12_02233 | Not Available | Negative | 2316547 - 2318070 | 52531.5 |
| flp pilus assembly protein cpab | PMI12_02234 | Not Available | Negative | 2318096 - 2318941 | 29177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
