Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic-type carbon monoxide dehydrogenase, small subunit coxs/cuts-like protein | PMI12_02134 | Not Available | Negative | 2215506 - 2216006 | 17356.9 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02135 | Not Available | Negative | 2215984 - 2217117 | 40303.5 |
| nicotinamidase-like amidase | PMI12_02136 | Not Available | Negative | 2217190 - 2217915 | 25395.4 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02137 | Not Available | Negative | 2217953 - 2218687 | 26967.8 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_02138 | Not Available | Negative | 2218684 - 2219490 | 29079.5 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_02139 | Not Available | Negative | 2219487 - 2221418 | 68471.3 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_02140 | Not Available | Negative | 2221447 - 2222652 | 43621.2 |
| protein of unknown function (duf1185) | PMI12_02141 | Not Available | Negative | 2222721 - 2223305 | 20346.6 |
| protein of unknown function (duf1185) | PMI12_02142 | Not Available | Negative | 2223337 - 2223978 | 22741.5 |
| hypothetical protein | PMI12_02143 | Not Available | Negative | 2224000 - 2224905 | 31942.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
