Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | PMI12_02074 | Not Available | Negative | 2137893 - 2139158 | 44176.4 |
| phosphonoacetaldehyde hydrolase | PMI12_02075 | Not Available | Negative | 2139271 - 2140104 | 29581.4 |
| fad dependent oxidoreductase tigr03364 | PMI12_02076 | Not Available | Negative | 2140154 - 2141284 | 40752.8 |
| putative 2-aminoethylphosphonate abc transporter, permease protein | PMI12_02077 | Not Available | Negative | 2141284 - 2142999 | 61028.7 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_02078 | Not Available | Negative | 2143003 - 2144085 | 38627.0 |
| putative 2-aminoethylphosphonate abc transporter, periplasmic binding protein | PMI12_02079 | Not Available | Negative | 2144204 - 2145238 | 37799.5 |
| phosphonate degradation operons associated hdig domain protein | PMI12_02080 | Not Available | Positive | 2145426 - 2145986 | 20483.6 |
| abc-type uncharacterized transport system, permease and atpase component | PMI12_02081 | Not Available | Positive | 2146096 - 2147886 | 66503.9 |
| queuosine biosynthesis protein quec | PMI12_02082 | Not Available | Negative | 2147868 - 2148572 | 25846.2 |
| alkaline phosphatase | PMI12_02083 | Not Available | Positive | 2148806 - 2150284 | 51529.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
