Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase b | PMI12_02034 | Not Available | Negative | 2087530 - 2088630 | 39703.2 |
| transglutaminase-like enzyme, predicted cysteine protease | PMI12_02035 | Not Available | Negative | 2088684 - 2090705 | 74396.2 |
| hypothetical protein | PMI12_02036 | Not Available | Negative | 2090719 - 2091690 | 35446.9 |
| moxr-like atpase | PMI12_02037 | Not Available | Negative | 2091821 - 2092741 | 32869.0 |
| deacetylase, histone deacetylase/acetoin utilization protein | PMI12_02038 | Not Available | Positive | 2092822 - 2093775 | 35034.6 |
| small-conductance mechanosensitive channel | PMI12_02039 | Not Available | Positive | 2093815 - 2095095 | 46565.5 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | PMI12_02040 | Not Available | Positive | 2095339 - 2096160 | 28843.6 |
| hypothetical protein | PMI12_02041 | Not Available | Positive | 2096229 - 2097425 | 44796.0 |
| hypothetical protein | PMI12_02042 | Not Available | Positive | 2097422 - 2099380 | 74231.5 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | PMI12_02043 | Not Available | Positive | 2099377 - 2101107 | 60401.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
