Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trehalose-phosphatase | PMI12_01964 | Not Available | Negative | 2014039 - 2014830 | 28408.3 |
| trna nucleotidyltransferase/poly(a) polymerase | PMI12_01965 | Not Available | Negative | 2014912 - 2016075 | 42129.7 |
| outer membrane protein w | PMI12_01966 | Not Available | Positive | 2016239 - 2016964 | 25618.5 |
| glutathione s-transferase | PMI12_01967 | Not Available | Negative | 2016987 - 2017673 | 25464.8 |
| soluble lytic murein transglycosylase-like protein | PMI12_01968 | Not Available | Negative | 2017788 - 2019821 | 74682.7 |
| 5,10-methenyltetrahydrofolate synthetase | PMI12_01969 | Not Available | Positive | 2019831 - 2020448 | 23012.7 |
| transcriptional regulator | PMI12_01970 | Not Available | Negative | 2020458 - 2021441 | 36669.9 |
| protein of unknown function (duf2917) | PMI12_01971 | Not Available | Positive | 2021615 - 2021932 | 11115.2 |
| sensor of blue-light using fad | PMI12_01972 | Not Available | Negative | 2022009 - 2022425 | 15395.5 |
| camp-binding protein | PMI12_01973 | Not Available | Positive | 2022517 - 2023287 | 29310.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
