Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator containing a chey-like receiver domain and an hth dna-binding domain | PMI12_01914 | Not Available | Positive | 1957710 - 1958501 | 27855.2 |
| signal transduction histidine kinase | PMI12_01915 | Not Available | Positive | 1958508 - 1960352 | 67321.4 |
| rod shape-determining protein roda | PMI12_01916 | Not Available | Positive | 1960385 - 1961539 | 41226.0 |
| putative zn-dependent protease-like protein | PMI12_01917 | Not Available | Positive | 1961661 - 1963121 | 51377.1 |
| hypothetical protein | PMI12_01918 | Not Available | Positive | 1963168 - 1963701 | 18158.4 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | PMI12_01919 | Not Available | Positive | 1963930 - 1965048 | 40627.4 |
| hypothetical protein | PMI12_01920 | Not Available | Negative | 1965045 - 1965554 | 18657.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | PMI12_01921 | Not Available | Negative | 1965551 - 1966954 | 49774.6 |
| hypothetical protein | PMI12_01922 | Not Available | Positive | 1967066 - 1967662 | 22170.4 |
| thiol-disulfide isomerase-like thioredoxin | PMI12_01923 | Not Available | Positive | 1967663 - 1968208 | 19267.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
