Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamidase-like amidase | PMI12_01874 | Not Available | Positive | 1918841 - 1919413 | 20411.0 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_01875 | Not Available | Positive | 1919410 - 1920030 | 21863.1 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_01876 | Not Available | Positive | 1919994 - 1920995 | 36047.2 |
| putative carboxypeptidase | PMI12_01877 | Not Available | Negative | 1921025 - 1922632 | 57668.0 |
| rna polymerase sigma factor, sigma-70 family | PMI12_01878 | Not Available | Negative | 1922680 - 1923978 | 46900.5 |
| hypothetical protein | PMI12_01879 | Not Available | Negative | 1923975 - 1924400 | 15174.2 |
| hypothetical protein | PMI12_01880 | Not Available | Negative | 1924443 - 1924874 | 15787.0 |
| hypothetical protein | PMI12_01881 | Not Available | Negative | 1925017 - 1925445 | 15875.0 |
| hypothetical protein | PMI12_01882 | Not Available | Negative | 1925447 - 1926298 | 31704.8 |
| integral membrane protein mvin | PMI12_01883 | Not Available | Negative | 1926373 - 1927926 | 55072.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
