Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s16 | PMI12_01864 | Not Available | Negative | 1910266 - 1910529 | 9644.72 |
| sortase-like acyltransferase | PMI12_01865 | Not Available | Positive | 1910710 - 1911234 | 18762.3 |
| tm2 domain-containing protein | PMI12_01866 | Not Available | Positive | 1911242 - 1911688 | 16413.1 |
| phosphate/sulfate permease | PMI12_01867 | Not Available | Negative | 1911692 - 1912702 | 35194.6 |
| phosphate transport regulator related to phou | PMI12_01868 | Not Available | Negative | 1912717 - 1913361 | 24625.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | PMI12_01869 | Not Available | Negative | 1913488 - 1914099 | 21397.8 |
| poly(a) polymerase | PMI12_01870 | Not Available | Negative | 1914096 - 1915694 | 59320.8 |
| dnaa regulatory inactivator hda | PMI12_01871 | Not Available | Negative | 1915721 - 1916479 | 27555.3 |
| phosphoribosylaminoimidazole synthetase | PMI12_01872 | Not Available | Positive | 1916548 - 1917588 | 35908.6 |
| putative permease | PMI12_01873 | Not Available | Positive | 1917639 - 1918721 | 39012.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
