Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent protease with chaperone function | PMI12_01854 | Not Available | Positive | 1901776 - 1903035 | 46045.0 |
| pterin-4a-carbinolamine dehydratase | PMI12_01855 | Not Available | Positive | 1903062 - 1903412 | 12684.0 |
| ribosome small subunit-dependent gtpase a | PMI12_01856 | Not Available | Positive | 1903425 - 1904375 | 34388.1 |
| hypothetical protein | PMI12_01857 | Not Available | Negative | 1904388 - 1905413 | 37803.5 |
| histidinol-phosphate aminotransferase | PMI12_01858 | Not Available | Negative | 1905427 - 1906518 | 39880.0 |
| cobalamin biosynthesis protein cobd/cbib | PMI12_01859 | Not Available | Negative | 1906535 - 1907536 | 36221.7 |
| ntp pyrophosphohydrolase | PMI12_01860 | Not Available | Negative | 1907578 - 1908318 | 26805.9 |
| ribosomal protein l19 | PMI12_01861 | Not Available | Negative | 1908443 - 1908820 | 13953.0 |
| trna (guanine-n1)-methyltransferase | PMI12_01862 | Not Available | Negative | 1908931 - 1909677 | 27038.4 |
| 16s rrna processing protein rimm | PMI12_01863 | Not Available | Negative | 1909694 - 1910248 | 20003.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
