Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_01794 | Not Available | Positive | 1841139 - 1842074 | 33758.4 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | PMI12_01795 | Not Available | Positive | 1842099 - 1842992 | 31731.6 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_01796 | Not Available | Positive | 1843003 - 1844043 | 37841.3 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | PMI12_01797 | Not Available | Positive | 1844040 - 1845038 | 36425.2 |
| n-acyl-d-aspartate/d-glutamate deacylase | PMI12_01798 | Not Available | Positive | 1845055 - 1846512 | 52266.5 |
| hypothetical protein | PMI12_01799 | Not Available | Negative | 1846523 - 1846735 | 7566.02 |
| putative divalent heavy-metal cations transporter | PMI12_01800 | Not Available | Negative | 1846854 - 1847744 | 31582.2 |
| dienelactone hydrolase-like enzyme | PMI12_01801 | Not Available | Negative | 1847853 - 1848749 | 31183.2 |
| aspartate racemase | PMI12_01802 | Not Available | Negative | 1848853 - 1849602 | 26373.9 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_01803 | Not Available | Negative | 1849715 - 1850605 | 32118.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
