Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_01714 | Not Available | Negative | 1756053 - 1757462 | 49537.8 |
| hypothetical protein | PMI12_01715 | Not Available | Positive | 1757615 - 1757896 | 10175.9 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_01716 | Not Available | Negative | 1757803 - 1758492 | 24551.5 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_01717 | Not Available | Negative | 1758489 - 1759136 | 22733.5 |
| abc-type polar amino acid transport system, atpase component | PMI12_01718 | Not Available | Negative | 1759152 - 1759973 | 30010.3 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_01719 | Not Available | Negative | 1760004 - 1760861 | 31274.0 |
| transcriptional regulator containing an amidase domain and an arac-type dna-binding hth domain | PMI12_01720 | Not Available | Positive | 1761130 - 1762056 | 34219.4 |
| hypothetical protein | PMI12_01721 | Not Available | Positive | 1762310 - 1762495 | 6843.33 |
| dna-methyltransferase dcm | PMI12_01722 | Not Available | Negative | 1762950 - 1764239 | 48393.2 |
| restriction endonuclease | PMI12_01723 | Not Available | Positive | 1764720 - 1765601 | 31628.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
