Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_01704 | Not Available | Negative | 1743336 - 1743656 | 11863.1 |
| arabinose efflux permease family protein | PMI12_01705 | Not Available | Negative | 1743806 - 1745374 | 54102.5 |
| transcriptional regulator | PMI12_01706 | Not Available | Positive | 1745506 - 1746411 | 33251.0 |
| phosphate/phosphite/phosphonate abc transporters, periplasmic binding protein | PMI12_01707 | Not Available | Negative | 1747093 - 1748103 | 37120.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_01708 | Not Available | Positive | 1748431 - 1749117 | 24757.9 |
| signal transduction histidine kinase | PMI12_01709 | Not Available | Positive | 1749119 - 1750468 | 48584.4 |
| abc-type fe3+ transport system, periplasmic component | PMI12_01710 | Not Available | Positive | 1750600 - 1751649 | 37950.3 |
| abc-type fe3+ transport system, permease component | PMI12_01711 | Not Available | Positive | 1751660 - 1753882 | 78771.5 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_01712 | Not Available | Positive | 1753909 - 1754958 | 37284.2 |
| dna-binding domain-containing protein, arac-type | PMI12_01713 | Not Available | Positive | 1755020 - 1755994 | 36615.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
