Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | PMI12_01334 | Not Available | Negative | 1363570 - 1364352 | 27780.8 |
| acyl-coa dehydrogenase | PMI12_01335 | Not Available | Positive | 1364424 - 1366787 | 84786.9 |
| hypothetical protein | PMI12_01336 | Not Available | Positive | 1366831 - 1367817 | 34369.6 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_01337 | Not Available | Positive | 1367821 - 1369323 | 52654.4 |
| hypothetical protein | PMI12_01338 | Not Available | Positive | 1369505 - 1370185 | 23951.7 |
| topoisomerase ib | PMI12_01339 | Not Available | Negative | 1370128 - 1371315 | 43573.3 |
| purine nucleoside permease | PMI12_01340 | Not Available | Positive | 1371460 - 1372506 | 37791.8 |
| hypothetical protein | PMI12_01341 | Not Available | Negative | 1372513 - 1373196 | 25072.8 |
| nucleotidyltransferase/dna polymerase involved in dna repair | PMI12_01342 | Not Available | Negative | 1373204 - 1374421 | 44486.8 |
| hypothetical protein | PMI12_01343 | Not Available | Positive | 1374560 - 1375399 | 28640.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
