Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00862 | Not Available | Negative | 888670 - 888909 | 8758.79 |
| dihydrofolate reductase | PMI12_00863 | Not Available | Negative | 889114 - 889647 | 19244.8 |
| thymidylate synthase | PMI12_00864 | Not Available | Negative | 889644 - 890486 | 31886.8 |
| nitrile hydratase, alpha subunit | PMI12_00865 | Not Available | Positive | 890638 - 891222 | 21093.2 |
| nitrile hydratase, beta subunit | PMI12_00866 | Not Available | Positive | 891219 - 891884 | 24109.4 |
| nitrile hydratase accessory protein | PMI12_00867 | Not Available | Positive | 891946 - 892314 | 13256.4 |
| acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase | PMI12_00868 | Not Available | Positive | 892512 - 893732 | 42685.8 |
| glutathione s-transferase | PMI12_00869 | Not Available | Negative | 893741 - 894445 | 25926.2 |
| abc-type phosphate/phosphonate transport system, periplasmic component | PMI12_00870 | Not Available | Negative | 894528 - 895364 | 29517.3 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | PMI12_00871 | Not Available | Negative | 895508 - 896188 | 24730.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
