Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_00672 | Not Available | Positive | 697822 - 698943 | 40570.3 |
| 2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase | PMI12_00673 | Not Available | Positive | 698951 - 700603 | 59996.2 |
| protein of unknown function (duf2783) | PMI12_00674 | Not Available | Positive | 700600 - 700818 | 7710.9 |
| zn-dependent hydrolase, glyoxylase | PMI12_00675 | Not Available | Positive | 700815 - 701780 | 34887.6 |
| hypothetical protein | PMI12_00676 | Not Available | Positive | 701830 - 702804 | 34508.2 |
| putative membrane protein | PMI12_00677 | Not Available | Negative | 702907 - 703245 | 12308.3 |
| putative branched-chain amino acid permease (azaleucine resistance) | PMI12_00678 | Not Available | Negative | 703242 - 703982 | 26766.6 |
| methionyl-trna formyltransferase | PMI12_00679 | Not Available | Negative | 703982 - 704941 | 33733.8 |
| hypothetical protein | PMI12_00680 | Not Available | Negative | 704938 - 705447 | 18717.2 |
| peptide deformylase | PMI12_00681 | Not Available | Negative | 705452 - 705970 | 19255.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
