Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin biosynthesis protein cobw | PMI12_05584 | Not Available | Positive | 5871526 - 5872593 | 38953.4 |
| cobaltochelatase, cobn subunit | PMI12_05585 | Not Available | Positive | 5872606 - 5876427 | 138034.0 |
| mg-chelatase subunit chli | PMI12_05586 | Not Available | Positive | 5876424 - 5877479 | 36257.7 |
| mg-chelatase subunit chld | PMI12_05587 | Not Available | Positive | 5877533 - 5878132 | 21989.2 |
| set domain-containing protein | PMI12_05588 | Not Available | Negative | 5878102 - 5878614 | 18371.3 |
| abc-type fe3+-hydroxamate transport system, periplasmic component | PMI12_05589 | Not Available | Negative | 5878640 - 5879575 | 32769.9 |
| serine/threonine protein kinase involved in cell cycle control | PMI12_05590 | Not Available | Negative | 5879598 - 5880449 | 32050.6 |
| hypothetical protein | PMI12_05591 | Not Available | Negative | 5880446 - 5881519 | 39906.9 |
| hypothetical protein | PMI12_05592 | Not Available | Negative | 5882085 - 5882474 | 14615.4 |
| hypothetical protein | PMI12_05593 | Not Available | Positive | 5882767 - 5883738 | 34276.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
