Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease i | PMI12_05431 | Not Available | Positive | 5690296 - 5691735 | 54421.7 |
| hypothetical protein | PMI12_05432 | Not Available | Negative | 5691790 - 5692767 | 33908.5 |
| nad-dependent protein deacetylase, sir2 family | PMI12_05433 | Not Available | Positive | 5692837 - 5693679 | 29917.5 |
| esterase/lipase | PMI12_05434 | Not Available | Negative | 5693676 - 5694560 | 31232.5 |
| cytosine deaminase-like metal-dependent hydrolase | PMI12_05435 | Not Available | Negative | 5694634 - 5695920 | 45987.7 |
| arabinose efflux permease family protein | PMI12_05436 | Not Available | Negative | 5695976 - 5697394 | 48250.4 |
| dna-binding domain-containing protein, arac-type | PMI12_05437 | Not Available | Positive | 5697507 - 5698331 | 30605.6 |
| hypothetical protein | PMI12_05438 | Not Available | Negative | 5698348 - 5698800 | 16361.3 |
| putative abc-type transport system, permease component | PMI12_05439 | Not Available | Negative | 5698800 - 5699723 | 32637.0 |
| abc-type uncharacterized transport system, permease component | PMI12_05440 | Not Available | Negative | 5699791 - 5700855 | 36545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
