Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-dependent dehydrogenase | PMI12_05319 | Not Available | Positive | 5590395 - 5591729 | 50030.8 |
| hypothetical protein | PMI12_05320 | Not Available | Negative | 5591860 - 5592459 | 22314.5 |
| hypothetical protein | PMI12_05321 | Not Available | Positive | 5592506 - 5593282 | 27664.6 |
| nicotinamidase-like amidase | PMI12_05322 | Not Available | Negative | 5593262 - 5593936 | 25126.8 |
| putative abc-type transport system, permease component | PMI12_05323 | Not Available | Negative | 5593933 - 5594865 | 32426.5 |
| abc-type uncharacterized transport system, permease component | PMI12_05324 | Not Available | Negative | 5594862 - 5595986 | 40277.9 |
| atpase component of uncharacterized abc-type transporter | PMI12_05325 | Not Available | Negative | 5595979 - 5597505 | 53996.1 |
| putative abc-type transport system, periplasmic component/surface lipoprotein | PMI12_05326 | Not Available | Negative | 5597529 - 5598635 | 39375.0 |
| putative lactoylglutathione lyase | PMI12_05327 | Not Available | Negative | 5598704 - 5599090 | 14395.3 |
| dioxygenase, isopenicillin n synthase | PMI12_05328 | Not Available | Negative | 5599095 - 5600096 | 36755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
