Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na/pi-cotransporter | PMI12_05309 | Not Available | Negative | 5578886 - 5580547 | 59780.8 |
| putative phosphohydrolase | PMI12_05310 | Not Available | Negative | 5580612 - 5581466 | 31046.0 |
| abc-type spermidine/putrescine transport system, atpase component | PMI12_05311 | Not Available | Negative | 5581463 - 5582524 | 38183.2 |
| abc-type spermidine/putrescine transport system, permease component ii | PMI12_05312 | Not Available | Negative | 5582514 - 5583314 | 28969.3 |
| abc-type sulfate transport system, permease component | PMI12_05313 | Not Available | Negative | 5583328 - 5584149 | 29399.3 |
| hypothetical protein | PMI12_05314 | Not Available | Negative | 5584492 - 5584902 | 14464.6 |
| rhs repeat-associated core domain protein containing protein | PMI12_05315 | Not Available | Negative | 5585388 - 5586111 | 27121.9 |
| abc-type nitrate/sulfonate/bicarbonate transport system, atpase component | PMI12_05316 | Not Available | Negative | 5586112 - 5586650 | 20051.6 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_05317 | Not Available | Negative | 5586650 - 5587684 | 36352.1 |
| malic enzyme | PMI12_05318 | Not Available | Negative | 5587865 - 5590165 | 82141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
