Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator containing a chey-like receiver domain and a ggdef domain | PMI12_05289 | Not Available | Positive | 5555002 - 5555400 | 14656.7 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_05290 | Not Available | Positive | 5555400 - 5555765 | 13595.6 |
| chemotaxis signal transduction protein | PMI12_05291 | Not Available | Positive | 5555785 - 5556318 | 18824.4 |
| methyl-accepting chemotaxis protein | PMI12_05292 | Not Available | Positive | 5556361 - 5558676 | 81702.4 |
| chemotaxis protein histidine kinase-like protein | PMI12_05293 | Not Available | Positive | 5558708 - 5564827 | 218391.0 |
| deoxyribodipyrimidine photolyase | PMI12_05294 | Not Available | Negative | 5564885 - 5566387 | 56235.0 |
| putative transcriptional regulator | PMI12_05295 | Not Available | Positive | 5566388 - 5566987 | 21584.8 |
| hypothetical protein | PMI12_05296 | Not Available | Negative | 5567658 - 5567816 | 6271.67 |
| hypothetical protein | PMI12_05297 | Not Available | Positive | 5568550 - 5568783 | 8706.07 |
| 2-hydroxychromene-2-carboxylate isomerase | PMI12_05298 | Not Available | Positive | 5568780 - 5569415 | 23301.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
