Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-type sugar transport system, periplasmic component | PMI12_05249 | Not Available | Positive | 5513446 - 5514390 | 32833.2 |
| hypothetical protein | PMI12_05250 | Not Available | Positive | 5514410 - 5514601 | 7070.77 |
| hypothetical protein | PMI12_05251 | Not Available | Negative | 5514623 - 5516134 | 55422.6 |
| transcriptional regulator | PMI12_05252 | Not Available | Positive | 5516355 - 5516810 | 16598.4 |
| peroxiredoxin, ohr subfamily | PMI12_05253 | Not Available | Positive | 5516903 - 5517328 | 14214.0 |
| protein of unknown function (duf2855) | PMI12_05254 | Not Available | Positive | 5517489 - 5518604 | 40580.8 |
| putative homoserine kinase type ii (protein kinase fold) | PMI12_05255 | Not Available | Positive | 5518639 - 5519673 | 38781.7 |
| transcriptional regulator | PMI12_05256 | Not Available | Negative | 5519670 - 5520650 | 35673.4 |
| acyl-coa dehydrogenase | PMI12_05257 | Not Available | Positive | 5520743 - 5522437 | 61442.1 |
| hypothetical protein | PMI12_05258 | Not Available | Positive | 5522474 - 5523451 | 34049.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
