Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05239 | Not Available | Positive | 5502547 - 5502717 | 6502.12 |
| abc-type bacteriocin/lantibiotic exporter | PMI12_05240 | Not Available | Positive | 5502793 - 5504610 | 65261.5 |
| type i secretion membrane fusion protein, hlyd family | PMI12_05241 | Not Available | Positive | 5504656 - 5505972 | 48113.5 |
| outer membrane protein | PMI12_05242 | Not Available | Positive | 5505969 - 5507531 | 56735.9 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PMI12_05243 | Not Available | Negative | 5507677 - 5509308 | 57511.8 |
| factor for inversion stimulation fis, transcriptional activator | PMI12_05244 | Not Available | Negative | 5509325 - 5509561 | 9088.16 |
| putative tim-barrel protein, nifr3 family | PMI12_05245 | Not Available | Negative | 5509579 - 5510643 | 38901.7 |
| putative membrane protein | PMI12_05246 | Not Available | Positive | 5510819 - 5511283 | 16964.2 |
| glutathione s-transferase | PMI12_05247 | Not Available | Negative | 5511284 - 5511958 | 24889.1 |
| gtp-binding protein ychf | PMI12_05248 | Not Available | Negative | 5512146 - 5513237 | 39410.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
