Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | PMI12_05229 | Not Available | Positive | 5491685 - 5493130 | 53315.8 |
| ferredoxin | PMI12_05230 | Not Available | Positive | 5493142 - 5493465 | 11313.5 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_05231 | Not Available | Positive | 5493562 - 5494758 | 42673.0 |
| branched-chain amino acid abc-type transport system, permease component | PMI12_05232 | Not Available | Positive | 5494778 - 5495638 | 30097.3 |
| abc-type branched-chain amino acid transport system, permease component | PMI12_05233 | Not Available | Positive | 5495766 - 5496728 | 34123.9 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_05234 | Not Available | Positive | 5496725 - 5497492 | 27414.3 |
| abc-type branched-chain amino acid transport system, atpase component | PMI12_05235 | Not Available | Positive | 5497485 - 5498189 | 25658.2 |
| hypothetical protein | PMI12_05236 | Not Available | Positive | 5498253 - 5498738 | 14790.6 |
| outer membrane protein/peptidoglycan-associated lipoprotein | PMI12_05237 | Not Available | Positive | 5498824 - 5499330 | 18446.8 |
| udp-n-acetylmuramyl pentapeptide synthase | PMI12_05238 | Not Available | Positive | 5499440 - 5502550 | 113686.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
