Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_05219 | Not Available | Positive | 5480185 - 5480874 | 25587.1 |
| abc-type polar amino acid transport system, atpase component | PMI12_05220 | Not Available | Positive | 5480902 - 5481401 | 18320.6 |
| rhs family protein | PMI12_05221 | Not Available | Positive | 5481403 - 5484644 | 120692.0 |
| hypothetical protein | PMI12_05222 | Not Available | Negative | 5484890 - 5485432 | 19514.6 |
| transcriptional regulator | PMI12_05223 | Not Available | Positive | 5485556 - 5486536 | 35712.2 |
| hypothetical protein | PMI12_05224 | Not Available | Negative | 5486546 - 5486719 | 6038.22 |
| putative phosphohydrolase | PMI12_05225 | Not Available | Positive | 5486845 - 5487651 | 29741.3 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_05226 | Not Available | Positive | 5487757 - 5489256 | 51992.6 |
| transcriptional regulator | PMI12_05227 | Not Available | Negative | 5489344 - 5490078 | 27032.7 |
| rieske (2fe-2s) domain-containing protein | PMI12_05228 | Not Available | Positive | 5490341 - 5491675 | 49567.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
