Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05209 | Not Available | Negative | 5469228 - 5469770 | 19291.5 |
| pseudouridylate synthase, 16s rrna | PMI12_05210 | Not Available | Negative | 5469849 - 5470577 | 26468.2 |
| zn-dependent hydrolase, glyoxylase | PMI12_05211 | Not Available | Negative | 5470574 - 5472238 | 59293.6 |
| hypothetical protein | PMI12_05212 | Not Available | Positive | 5472358 - 5473359 | 35534.7 |
| hypothetical protein | PMI12_05213 | Not Available | Negative | 5473369 - 5474100 | 26073.4 |
| amidase, asp-trnaasn/glu-trnagln amidotransferase a subunit | PMI12_05214 | Not Available | Negative | 5474167 - 5475609 | 51856.9 |
| transcriptional regulator | PMI12_05215 | Not Available | Positive | 5475671 - 5476660 | 36297.6 |
| aspartate ammonia-lyase | PMI12_05216 | Not Available | Positive | 5476832 - 5478286 | 51840.5 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_05217 | Not Available | Positive | 5478455 - 5479354 | 32197.6 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_05218 | Not Available | Positive | 5479452 - 5480183 | 26838.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
