Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved protein of dim6/ntab family | PMI12_05198 | Not Available | Negative | 5457052 - 5457675 | 22559.9 |
| fad-dependent dehydrogenase | PMI12_05199 | Not Available | Negative | 5457701 - 5459338 | 58617.4 |
| cysteine synthase a | PMI12_05200 | Not Available | Negative | 5459480 - 5460400 | 32111.0 |
| hemoglobin-like flavoprotein | PMI12_05201 | Not Available | Negative | 5460516 - 5461700 | 42720.0 |
| transcriptional regulator containing gaf, aaa-type atpase, and dna binding domain containing protein | PMI12_05202 | Not Available | Positive | 5461836 - 5463422 | 56684.9 |
| transcriptional regulator | PMI12_05204 | Not Available | Positive | 5463970 - 5464476 | 18148.8 |
| putative membrane protein | PMI12_05205 | Not Available | Positive | 5464480 - 5466591 | 75121.3 |
| protein of unknown function (duf1656) | PMI12_05206 | Not Available | Positive | 5466588 - 5466794 | 7764.81 |
| rnd family efflux transporter, mfp subunit | PMI12_05207 | Not Available | Positive | 5466808 - 5467746 | 33413.0 |
| efflux transporter, outer membrane factor lipoprotein, nodt family | PMI12_05208 | Not Available | Positive | 5467743 - 5469218 | 51555.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
