Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator with putative antiterminator output domain | PMI12_05188 | Not Available | Positive | 5447408 - 5448670 | 46783.1 |
| abc-type nitrate/sulfonate/bicarbonate transport system, periplasmic component | PMI12_05189 | Not Available | Positive | 5449010 - 5450254 | 45581.0 |
| nitrate abc transporter, permease protein | PMI12_05190 | Not Available | Positive | 5450265 - 5451209 | 34218.5 |
| nitrate transport atp-binding subunits c and d | PMI12_05191 | Not Available | Positive | 5451206 - 5452015 | 29124.5 |
| hypothetical protein | PMI12_05192 | Not Available | Positive | 5452243 - 5453076 | 29164.1 |
| protein of unknown function (duf3025) | PMI12_05193 | Not Available | Positive | 5453073 - 5453825 | 27368.0 |
| zn-dependent protease with chaperone function | PMI12_05194 | Not Available | Positive | 5453976 - 5454848 | 30760.0 |
| hypothetical protein | PMI12_05195 | Not Available | Negative | 5454920 - 5455462 | 18812.7 |
| hypothetical protein | PMI12_05196 | Not Available | Negative | 5455459 - 5455902 | 16363.7 |
| activator of osmoprotectant transporter prop | PMI12_05197 | Not Available | Negative | 5456048 - 5457001 | 34904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
