Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05178 | Not Available | Positive | 5439182 - 5439727 | 18951.5 |
| phosphotransferase system, mannose/fructose-specific component iia | PMI12_05179 | Not Available | Positive | 5439860 - 5440315 | 16331.9 |
| phosphotransferase system hpr (hpr) family protein | PMI12_05180 | Not Available | Positive | 5440284 - 5440553 | 9583.72 |
| phosphoenolpyruvate-protein phosphotransferase | PMI12_05181 | Not Available | Positive | 5440564 - 5442372 | 66063.6 |
| hypothetical protein | PMI12_05182 | Not Available | Positive | 5442506 - 5442880 | 12529.7 |
| hypothetical protein | PMI12_05183 | Not Available | Positive | 5442934 - 5443398 | 16676.8 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_05184 | Not Available | Negative | 5443583 - 5444866 | 46653.9 |
| molecular chaperone (small heat shock protein) | PMI12_05185 | Not Available | Positive | 5444991 - 5445362 | 13614.3 |
| putative esterase | PMI12_05186 | Not Available | Positive | 5445552 - 5446307 | 27824.2 |
| putative glycoprotease gcp | PMI12_05187 | Not Available | Negative | 5446243 - 5447304 | 36947.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
