Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l22, bacterial type | PMI12_05168 | Not Available | Positive | 5433706 - 5434038 | 12072.8 |
| ribosomal protein s3, bacterial type | PMI12_05169 | Not Available | Positive | 5434056 - 5434967 | 33152.9 |
| ribosomal protein l16, bacterial/organelle | PMI12_05170 | Not Available | Positive | 5434997 - 5435413 | 15360.8 |
| ribosomal protein l29 | PMI12_05171 | Not Available | Positive | 5435427 - 5435678 | 9186.25 |
| 30s ribosomal protein s17 | PMI12_05172 | Not Available | Positive | 5435688 - 5435957 | 10188.6 |
| peroxiredoxin | PMI12_05173 | Not Available | Positive | 5436033 - 5436539 | 17591.9 |
| acetyltransferase | PMI12_05174 | Not Available | Negative | 5436625 - 5437212 | 21165.1 |
| cytochrome b | PMI12_05175 | Not Available | Negative | 5437209 - 5437919 | 25471.3 |
| cytochrome c556 | PMI12_05176 | Not Available | Positive | 5438078 - 5438524 | 15639.7 |
| peroxiredoxin | PMI12_05177 | Not Available | Negative | 5438593 - 5439090 | 17630.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
