Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | PMI12_05158 | Not Available | Positive | 5427451 - 5427912 | 16721.8 |
| superoxide dismutase | PMI12_05159 | Not Available | Positive | 5427906 - 5428030 | 4954.9 |
| ribosomal protein s10, bacterial/organelle | PMI12_05160 | Not Available | Positive | 5428071 - 5428385 | 11834.6 |
| hypothetical protein | PMI12_05161 | Not Available | Positive | 5428774 - 5430162 | 48179.8 |
| hypothetical protein | PMI12_05162 | Not Available | Positive | 5430180 - 5430734 | 18769.4 |
| 50s ribosomal protein l3, bacterial | PMI12_05163 | Not Available | Positive | 5430948 - 5431628 | 23717.5 |
| 50s ribosomal protein l4, bacterial/organelle | PMI12_05164 | Not Available | Positive | 5431628 - 5432248 | 23040.8 |
| ribosomal protein l23 | PMI12_05165 | Not Available | Positive | 5432245 - 5432580 | 12062.8 |
| ribosomal protein l2, bacterial/organellar | PMI12_05166 | Not Available | Positive | 5432583 - 5433407 | 30028.4 |
| ribosomal protein s19, bacterial/organelle | PMI12_05167 | Not Available | Positive | 5433418 - 5433696 | 10400.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
