Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_05148 | Not Available | Positive | 5416570 - 5417700 | 39763.1 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_05149 | Not Available | Negative | 5417732 - 5418430 | 25429.5 |
| osmosensitive k+ channel histidine kinase | PMI12_05150 | Not Available | Negative | 5418435 - 5421191 | 97931.6 |
| hypothetical protein | PMI12_05151 | Not Available | Negative | 5421204 - 5421335 | 4983.37 |
| hypothetical protein | PMI12_05152 | Not Available | Negative | 5421325 - 5421702 | 13772.7 |
| k+-transporting atpase, c subunit | PMI12_05153 | Not Available | Negative | 5421719 - 5422357 | 21691.9 |
| k+-transporting atpase, b subunit | PMI12_05154 | Not Available | Negative | 5422371 - 5424470 | 73914.5 |
| k+-transporting atpase, kdpa | PMI12_05155 | Not Available | Negative | 5424481 - 5426280 | 62988.9 |
| hypothetical protein | PMI12_05156 | Not Available | Negative | 5426377 - 5426511 | 4434.5 |
| putative transcriptional regulator | PMI12_05157 | Not Available | Positive | 5426754 - 5427419 | 24336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
