Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05138 | Not Available | Negative | 5406943 - 5407281 | 11026.9 |
| signal transduction histidine kinase | PMI12_05139 | Not Available | Negative | 5407424 - 5408803 | 49721.8 |
| response regulator with chey-like receiver domain and winged-helix dna-binding domain | PMI12_05140 | Not Available | Negative | 5408832 - 5409488 | 23998.8 |
| hypothetical protein | PMI12_05141 | Not Available | Negative | 5409574 - 5410629 | 38624.6 |
| pseudouridylate synthase, 16s rrna | PMI12_05142 | Not Available | Negative | 5410668 - 5411501 | 30913.7 |
| cytidyltransferase-related enzyme | PMI12_05143 | Not Available | Positive | 5411555 - 5412655 | 41309.9 |
| nicotinic acid phosphoribosyltransferase | PMI12_05144 | Not Available | Positive | 5412723 - 5414168 | 52678.6 |
| udp-n-acetylglucosamine:lps n-acetylglucosamine transferase | PMI12_05145 | Not Available | Positive | 5414259 - 5415413 | 41345.5 |
| hypothetical protein | PMI12_05146 | Not Available | Positive | 5415410 - 5415913 | 19052.1 |
| protein tyrosine/serine phosphatase | PMI12_05147 | Not Available | Positive | 5415910 - 5416482 | 21293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
