Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05128 | Not Available | Positive | 5395445 - 5396212 | 28278.4 |
| hypothetical protein | PMI12_05129 | Not Available | Positive | 5396216 - 5397337 | 41133.3 |
| hypothetical protein | PMI12_05130 | Not Available | Negative | 5397327 - 5398985 | 59441.9 |
| hypothetical protein | PMI12_05131 | Not Available | Negative | 5399135 - 5400118 | 34222.7 |
| hypothetical protein | PMI12_05132 | Not Available | Negative | 5400196 - 5400753 | 17572.4 |
| molecular chaperone of hsp90 family | PMI12_05133 | Not Available | Negative | 5400750 - 5402786 | 74645.2 |
| abc-type fe3+ transport system, periplasmic component | PMI12_05134 | Not Available | Negative | 5402904 - 5403938 | 37565.6 |
| transcriptional regulator | PMI12_05135 | Not Available | Negative | 5403991 - 5404905 | 33195.3 |
| zn-dependent oxidoreductase, nadph:quinone reductase | PMI12_05136 | Not Available | Positive | 5405005 - 5406018 | 35226.7 |
| mip family channel protein | PMI12_05137 | Not Available | Positive | 5406194 - 5406910 | 23954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
