Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-(acyl-carrier-protein) synthase | PMI12_05118 | Not Available | Negative | 5384750 - 5385955 | 42046.8 |
| hypothetical protein | PMI12_05119 | Not Available | Negative | 5386093 - 5387517 | 50733.9 |
| peptidase family m48 | PMI12_05120 | Not Available | Positive | 5387540 - 5388394 | 30283.5 |
| exodeoxyribonuclease iii | PMI12_05121 | Not Available | Negative | 5388438 - 5389241 | 30081.7 |
| orotate phosphoribosyltransferase | PMI12_05122 | Not Available | Positive | 5389254 - 5389937 | 24089.6 |
| hypothetical protein | PMI12_05123 | Not Available | Positive | 5389952 - 5390644 | 26004.4 |
| putative acyl-coa transferase/carnitine dehydratase | PMI12_05124 | Not Available | Positive | 5390822 - 5391961 | 40601.6 |
| nucleotide sugar dehydrogenase | PMI12_05125 | Not Available | Negative | 5391947 - 5393299 | 48442.2 |
| glycosyl transferase | PMI12_05126 | Not Available | Positive | 5393385 - 5394410 | 37016.4 |
| hypothetical protein | PMI12_05127 | Not Available | Positive | 5394445 - 5395455 | 35795.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
