Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/tyrosine/aromatic aminotransferase | PMI12_05098 | Not Available | Negative | 5364581 - 5365777 | 43728.1 |
| transcription antitermination factor nusb | PMI12_05099 | Not Available | Negative | 5365774 - 5366319 | 20010.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | PMI12_05100 | Not Available | Negative | 5366316 - 5366777 | 16047.2 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | PMI12_05101 | Not Available | Negative | 5366784 - 5367938 | 40855.4 |
| riboflavin synthase, alpha subunit | PMI12_05102 | Not Available | Negative | 5367935 - 5368597 | 23176.5 |
| riboflavin biosynthesis protein ribd | PMI12_05103 | Not Available | Negative | 5368653 - 5369768 | 38917.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PMI12_05104 | Not Available | Positive | 5369961 - 5370488 | 18829.9 |
| type iv pilus modification protein pilv | PMI12_05105 | Not Available | Positive | 5370482 - 5371033 | 18950.7 |
| tfp pilus assembly protein pilw | PMI12_05106 | Not Available | Positive | 5371030 - 5371842 | 28652.0 |
| tripartite tricarboxylate transporter tctb family | PMI12_05107 | Not Available | Positive | 5372077 - 5372613 | 18674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
