Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkyl sulfatase-like hydrolase | PMI12_05068 | Not Available | Negative | 5334366 - 5336354 | 72000.0 |
| transcriptional regulator | PMI12_05069 | Not Available | Positive | 5336428 - 5337342 | 33048.3 |
| conserved protein of dim6/ntab family | PMI12_05070 | Not Available | Positive | 5337452 - 5337895 | 15438.3 |
| putative periplasmic or secreted lipoprotein | PMI12_05071 | Not Available | Positive | 5337895 - 5338392 | 18109.1 |
| dmt(drug/metabolite transporter) superfamily permease | PMI12_05072 | Not Available | Positive | 5338478 - 5339386 | 33260.3 |
| glutaminase a | PMI12_05073 | Not Available | Positive | 5339383 - 5340327 | 33263.9 |
| nucleoside-diphosphate-sugar epimerase | PMI12_05074 | Not Available | Negative | 5340335 - 5341330 | 35728.1 |
| transcriptional regulator | PMI12_05075 | Not Available | Positive | 5341426 - 5342382 | 34325.6 |
| hypothetical protein | PMI12_05076 | Not Available | Positive | 5342379 - 5342879 | 18566.4 |
| putative amidohydrolase | PMI12_05077 | Not Available | Positive | 5343053 - 5344090 | 38334.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
