Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | PMI12_05058 | Not Available | Positive | 5320793 - 5321380 | 21672.4 |
| periplasmic component of amino acid abc-type transporter/signal transduction system | PMI12_05059 | Not Available | Negative | 5321400 - 5322287 | 32064.8 |
| glycine/d-amino acid oxidase, deaminating | PMI12_05060 | Not Available | Positive | 5322376 - 5323557 | 43371.6 |
| transcriptional regulator | PMI12_05061 | Not Available | Negative | 5324097 - 5324957 | 31456.5 |
| hypothetical protein | PMI12_05062 | Not Available | Positive | 5325307 - 5326842 | 58560.5 |
| hypothetical protein | PMI12_05063 | Not Available | Positive | 5327026 - 5327850 | 28539.5 |
| outer membrane protein (porin) | PMI12_05064 | Not Available | Positive | 5328537 - 5329757 | 42501.8 |
| abc-type branched-chain amino acid transport system, periplasmic component | PMI12_05065 | Not Available | Negative | 5330233 - 5331390 | 39786.0 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | PMI12_05066 | Not Available | Negative | 5331506 - 5333083 | 58021.9 |
| putative membrane protein required for spore maturation | PMI12_05067 | Not Available | Positive | 5333155 - 5334384 | 42958.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
