Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PMI12_05038 | Not Available | Positive | 5300979 - 5301671 | 25289.7 |
| dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase | PMI12_05039 | Not Available | Negative | 5301694 - 5302425 | 24923.2 |
| putative 3-hydroxylacyl-(acyl carrier protein) dehydratase | PMI12_05040 | Not Available | Negative | 5302422 - 5302895 | 16539.7 |
| hypothetical protein | PMI12_05041 | Not Available | Negative | 5302892 - 5303659 | 27794.6 |
| putative xylanase/chitin deacetylase | PMI12_05042 | Not Available | Negative | 5303656 - 5304495 | 29931.3 |
| putative exporter | PMI12_05043 | Not Available | Negative | 5304495 - 5306888 | 83521.7 |
| outer membrane lipoprotein-sorting protein | PMI12_05044 | Not Available | Negative | 5306888 - 5307496 | 21660.2 |
| putative acyltransferase | PMI12_05045 | Not Available | Negative | 5307486 - 5308508 | 37773.9 |
| acyl-coa synthetase/amp-acid ligase | PMI12_05046 | Not Available | Negative | 5308508 - 5310223 | 60625.2 |
| putative membrane protein | PMI12_05047 | Not Available | Negative | 5310240 - 5310884 | 23627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
