Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF313 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1000761 bp
Thymine Count
998408 bp
Guanine Count
2015388 bp
Cytosine Count
2014329 bp
Genome Length
6029174 bp
Protein-coding Genes
5584 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine aminopeptidase, type i | PMI12_05018 | Not Available | Positive | 5276228 - 5277052 | 29908.8 |
| (protein-pii) uridylyltransferase | PMI12_05019 | Not Available | Positive | 5277075 - 5279681 | 98098.9 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI12_05020 | Not Available | Positive | 5279725 - 5280762 | 36868.1 |
| diguanylate cyclase (ggdef) domain-containing protein | PMI12_05021 | Not Available | Negative | 5280782 - 5282131 | 49143.3 |
| hypothetical protein | PMI12_05022 | Not Available | Negative | 5282254 - 5282598 | 12190.9 |
| putative had superfamily hydrolase | PMI12_05023 | Not Available | Positive | 5282786 - 5283463 | 25526.5 |
| phosphoglucomutase, alpha-d-glucose phosphate-specific | PMI12_05024 | Not Available | Positive | 5283460 - 5285124 | 59649.5 |
| homoserine dehydrogenase | PMI12_05025 | Not Available | Negative | 5285197 - 5286558 | 46847.9 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_05026 | Not Available | Negative | 5286830 - 5287885 | 38559.1 |
| amine acid abc transporter, permease protein, 3-tm region, his/glu/gln/arg/opine family | PMI12_05027 | Not Available | Negative | 5287882 - 5288880 | 35543.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
